seer for Debian
===============

For more detailed documentation please see the seer Wiki page:

    https://github.com/johnlees/seer/wiki/Usage

There is also an example wrapper script in

    examples/example_wrapper.py


== Renamed Perl scripts ==

In the Debian packaged version the .pl extension was stripped from
the following scripts:

    blast_top_hits.pl       -> blast_top_hits
    hits_to_fastq.pl        -> hits_to_fastq
    mapping_to_phandango.pl -> mapping_to_phandango
    mash2matrix.pl          -> mash2matrix
    reformat_output.pl      -> reformat_output
    R_mds.pl                -> R_mds

 -- Andreas Tille <tille@debian.org>  Tue, 29 Mar 2016 19:32:29 +0200
